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Recent Publications

2012

Biology

 

M. Tollis and S. Boissinot (2012). The Evolutionary Dynamics of Transposable Elements in Eukaryote Genomes. Genome Dynamics Vol.7: Repetitive DNA: 68-91.

M. Tollis, G. Ausubel, D. Ghmire and S. Boissinot (2012). Multi-locus Phylogeographic and Population Genetic Analysis of Anolis carolinensis: Historical Demography of a Genomic Model Species. PLoS ONE 7: e38474.

E. Blass, M. Bell and S. Boissinot (2012). Accumulation and rapid decay of non-LTR retrotransposons in the genome of the three-spine stickleback. Genome Biology and Evolution 4: 687-702.

W. Ferguson, S. Dvora, R. Fikes, A.C. Stone, and S. Boissinot (2012). Long-term balancing selection at the anti-viral gene OAS1 maintains functionally different alleles in chimpanzees. Molecular Biology and Evolution. 29(4): 1093-1103. Recommended by the Faculty of 1,000.

Dennehy, J.J. What can bacteriophages tell us about host-parasite coevolution? 2012. International Journal of Evolutionary Biology. Article ID 396165, doi:10.1155/2012/396165.

Hatfull, G.F., Dennehy, JJ the Science Education Alliance Phage Hunters Advancing Genomics and Evolutionary Science Program, the KwaZulu-Natal Research Institute for Tuberculosis and HIV Mycobacterial Genetics Course Students, and the Phage Hunters Integrating Research and Education Program. 2012. The complete genome sequences of 138 mycobacteriophages. Journal of Virology 86: 2382-2384.

Ching, J., Musheyev, S.A., HSChowdhury, D., HSKim, J.A., Choi, Y.  & Dennehy, J. J. 2012. Intermediate dispersal rate maximizes adaptation in bacteriophage populations evolving in an ecological sink. Evolution, 67: 10–17.

Nakatsuka, N., S.N. Barnaby, K.R. Fath, I.A. Banerjee. 2012. Fabrication of collagen-elastin-bound peptide nanotubes for mammalian cell attachment. J. Biomater. Sci. Polym. Ed. 22(18): 1843-1862. PMID: 21967742.

Barnaby, S.N., K.R. Fath, A. Tsiola, I.A. Banerjee. 2012. Fabrication of ellagic acid incorporated self-assembled peptide microtubes and their applications. Colloids and Surfaces B: Biointerfaces, 95:154-161.

Sarker, N.H., S.N. Barnaby, K.R. Fath, S.H. Frayne, N. Nakatsuka, I.A. Banerjee. 2012. Biomimetic growth of gallic acid–ZnO hybrid assemblies and their applications. Journal of Nanoparticle Research, 14:1-12.

Barnaby, S.N., K.R. Fath, N. Nakatsuka, N.H. Sarker, I.A. Banerjee. 2012. Formation of calcium phosphate-ellagic acid composites by layer by layer assembly for cellular attachment to osteoblasts. Journal of Biomimetics, Biomaterials & Tissue Engineering, 13:1-17.

Barnaby, S.N., N. Nakatsuka, S.H. Frayne, K.R. Fath, and I.A. Banerjee. 2012. Formation of hyaluronic acid–ellagic acid microfiber hybrid hydrogels and their applications. Colloid & Polymer Science, 1-11. Online First. doi: 10.1007/s00396-012-2739-2.

Nakatsuka, N., S.N Barnaby, A. Tsiola, K.R. Fath, B.A. Williams, and I.A. Banerjee. 2012. Self-assembling peptide assemblies bound to ZnS nanoparticles and their interactions with mammalian cells. Colloids and Surfaces B: Biointerfaces (2010) doi:10.1016/j.colsurfb.2012.10.009

C. Singleman and N. G. Holtzman. “Analysis of Post-Embryonic Heart Development and Maturation in the Zebrafish, Danio rerio.” Developmental Dynamics, 241(12):1993-2004. 2012

Lahti, D. C. and C. Pytte. 2012.  Sleep and bird songs.  In D. Barrett and P. McNamara (eds.), Encyclopedia of Sleep and Dreams. Santa Barbara, CA: ABC-CLIO, pp. 596-597.

Johnson, N. A., D. C. Lahti, and D. T. Blumstein. 2012. Combating the assumption of evolutionary progress: lessons from the decay and loss of traits.  Evolution: Education & Outreach 5:128-138.

Palmisano, N. J. and A. Meléndez. Detection of Autophagy in C. elegans. Commisioned by Cold Spring Harbor. Cell Death Techniques. Edited by Ricky Johnstone and John Silke.

Lapierre, L. R., Meléndez, A., and M. Hansen, 2012. Autophagy links lipid metabolism to longevity. Autophagy 8(1): 144-6.

Muehlbauer, E., Edited six chapters for new edition, December 2012.  Essentials of Biology Laboratory Manual, Sylvia S. Mader, McGraw- Hill

Waldman, J., L. Maceda, and I. Wirgin.  2012. Mixed-stock analysis of wintertime aggregations of striped bass along the mid-Atlantic coast. Journal of Applied Ichthyology 28:1-6.

Wirgin, I., L. Maceda, J.R. Waldman, S. Wehrell, M. Dadswell, T. King.  2012. Stock origin of migratory Atlantic sturgeon in the Minas Basin, Inner Bay of Fundy, Canada, determined by microsatellite and mitochondrial DNA analyses. Transactions of the American Fisheries Society 141:1389-1498.

Grubel, C., J. Waldman, J. Lodge, and D. Suszkowski.  2012.  Rapid Assessment of Habitat and Wildlife Losses from Hurricane Sandy in the Hudson River Estuary. Final Report to the National Fish & Wildlife Foundation.  Washington, D.C.  23p.

Waldman, J., W. Solecki, T. Eaton, D. Yozzo, and B. Rosenzweig.  2012.  The Feasibility of Restoring Salinity Gradients to an Isohaline Urban Estuary, Jamaica Bay, New York.  Final Report to New York City Department of Environmental Protection.  50p. + appendices.

Waldman, J. 2012.  Ecology of Estuarine Fishes: Temperate Waters of the Western North Atlantic.  The Quarterly Review of Biology 87:381.

Sridharan, J., Haremaki, T., Jin, Y., Teegala, S., and Weinstein, D.C. (2012). Xmab21l3 mediates dorsoventral patterning in Xenopus laevis. Mech. Dev., 129, 136-146.

Kim, K., Lake, B.B., Haremaki, T, Weinstein, D.C., and Sokol, S.Y. (2012). Rab11 regulates planar polarity and migratory behavior of multiciliated cells in Xenopus embryonic epidermis. Dev. Dyn., 241, 1385-1395.

Haremaki, T., and Weinstein, D.C. (2012). Eif4a3 is required for accurate splicing of the Xenopus laevis ryanodine receptor pre-mRNA. Dev. Biol., 372, 103-110.

N. Maghsoudi 1,2, Z. Zakeri, R.A. Lockshin, 2012, Programmed cell death and apoptosis: where it came from and where it is going: from Elie Metchnikoff to the control of caspases. Exp Oncol: 34, 3, 146–152

 

Chemistry & Biochemistry

 

Mark D. Baker, A. David Baker, Jane Belanger, Christopher R. H. Hanusa, and Alana Michaels “Linear Relationship between Weighted-Average Madelung Constants and Density Functional Theory Energies for MgO Nanotubes“ J. Phys. Chem. C, 2012, 116 (48), pp 25588–25593

R. Bittman, D. Boger, A. B. Charette, S. E. Denmark, V. Farina, J. S. Johnson, M. J. Martinelli, S. W. McCombie, J. Montgomery, A. J. Phillips, J. B. Press, L. S. Press, T. Rovis, S. M. Weinreb, and P. Wipf, Organic Reactions, Volume 76, co-edited by John Wiley and Sons, Inc., 569 pages (2012).

R. Bittman, D. Boger, A. B. Charette, S. E. Denmark, V. Farina, P. Hergenrother, J. S. Johnson, M. J. Martinelli, S. W. McCombie, J. Montgomery, A. J. Phillips, J. B. Press, L. S. Press, T. Rovis, S. M. Weinreb, and P. Wipf, Organic Reactions, Volume 77, co-edited by John Wiley and Sons, Inc., 628 pages (2012).

R. Bittman, D. Boger, A. B. Charette, S. E. Denmark, V. Farina, P. Hergenrother, J. S. Johnson, M. J. Martinelli, S. W. McCombie, J. Montgomery, A. J. Phillips, J. B. Press, L. S. Press, T. Rovis, S. M. Weinreb, and P. Wipf, Organic Reactions, Volume 78, co-edited by John Wiley and Sons, Inc., 586 pages (2012)

L. Arana, P. Gangoiti, A. Ouro, I. G. Rivera, M. Ordoñez, M. Trueba, R. S. Lankalapalli, R. Bittman, and A. Gomez-Muñoz, “Generation of Reactive Oxygen Species (ROS) Is a Key Factor for Stimulation of Macrophage Proliferation by Ceramide 1-Phosphate,” Exp. Cell Res. 318, 350-360 (2012).

Z. Liu and R. Bittman, “Synthesis of C-Glycoside Analogues of a-Galactosylceramide via Linear Allylic CH Oxidation and Allyl Cyanate to Isocyanate Rearrangement,” Org. Lett. 14, 620-623 (2012).

C. Röhrl, C. Meisslitzer-Ruppitsch, R. Bittman, Z. Li, G. Pabst, R. Prassl, W. Strobl, J. Neumüller, A. Ellinger, M. Pavelka, and H. Stangl, “Combined Light and Electron Microscopy using Diaminobenzidine Photooxidation to Monitor Trafficking of Lipids Derived from Lipoprotein Particles,” Curr. Pharm. Biotechnol. 13, 331-340 (2012). [Special issue: New methodology and approaches in lipid transport in atherosclerosis and cardiovascular disease; PMID: 21470121.]

M. N. Perera, V. Ganesan, L. Siskind, Z. M. Szulc, J. Bielawaski, A. Bielawska, R. Bittman, and M. Colombini, “Ceramide Channels: Influence of Molecular Structure on Channel Formation in Membranes,” Biochim. Biophys. Acta – Biomembranes 1818, 1291-1301 (2012).

M. N. Perera, S. H. Lin, Y. K. Peterson, A. Bielawska, Z. M. Szulc, R. Bittman, and M. Colombini, “Bax and Bcl-XL Exert Their Regulation on Different Sites of the Ceramide Channel,” Biochem. J. 445, 81-91 (2012).

A. Kumar, A. K. Pandurangan, F. Lu, H. Fyrst, M. Zhang, H. S. Byun, R. Bittman, and J. D. Saba, “Chemopreventive Sphingadienes Downregulate Wnt Signaling via a PP2A/Akt/GSK3ß Pathway in Colon Cancer,” Carcinogenesis 33, 1726-1735 (2012).

T. Blom, Z. Li, R. Bittman, P. Somerharju, and E. Ikonen, “Tracking Sphingosine Metabolism and Transport in Sphingolipidoses: NPC1 Deficiency as a Test Case,” Traffic 13, 1234-1243 (2012).

K. G. Lim, F. Tonelli, E. Berdyshev, I. Gorshkova, T. Leclercq, S. M. Pitson, R. Bittman, S. Pyne, and N. J. Pyne, “Inhibition Kinetics and Regulation of Sphingosine Kinase 1 Expression in Prostate Cancer Cells: Functional Differences between Sphingosine Kinase 1a and 1b,” Int. J. Biochem. Cell Biol. 44, 1457-1464 (2012).

P. Upadhyaya, A. Kumar, H.-S. Byun, R. Bittman, J. D. Saba, and S. S. Hecht, “The Sphingolipid Degradation Product trans-2-Hexadecenal Forms Adducts with DNA,” Biochem. Biophys. Res. Commun. 424, 18-21 (2012).

Z. Liu, A. N. Courtney, L. S. Metelitsa, and R. Bittman, C-Glycosphingolipids with an exo-Methylene Substituent: Stereocontrolled Synthesis and Immunostimulation of Mouse and Human Natural Killer T Lymphocytes,” ChemBioChem 13, 1733-1737 (2012).

J. W. Walters, J. L. Anderson, R. Bittman, M. Pack, and S. A. Farber, “Visualization of Lipid Metabolism in the Zebrafish Intestine Reveals a Relationship between NPC1L1-Mediated Cholesterol Uptake and Dietary Fatty Acid,” Chem. Biol. 19, 913-925 (2012).

F. W. Lund, M. A. Lomholt, L. M .Solanko, R. Bittman, and Daniel Wüstner, “Two-Photon Time-Lapse Microscopy of BODIPY-Cholesterol Reveals Anomalous Sterol Diffusion in Chinese Hamster Ovary Cells,” BMC Biophysics 5, 20 doi:10.1186/2046-1682-5-20 (2012).

H.-S. Byun and R. Bittman, “Practical Multigram-scale Synthesis of 4,6- and 4,8-Sphingadienes, Chemopreventive Sphingoid Bases,” Chem. Phys. Lipids 165, 794-801 (2012).

F. Tonelli, M. Al Osaimi, L. Williamson, R. J. Tate, D. G. Watson, E. Chan, R. Bittman, N. J. Pyne, and S. Pyne, “The Sphingosine Kinase Inhibitor 2-(p-Hydroxyanilino)-4-(p-chlorophenyl)thiazole Reduces Androgen Receptor Expression via an Oxidative Stress Dependent Mechanism,”,Br. J. Pharmacol. 5, 20.doi:10.1111/bph.12035 (2012).

Bittman, R., Patent disclosure, serial # 61/668,637, R. Bittman, Z. Liu, A. N. Courtney, and L. S. Metelitsa, “C-Glycosphingolipids with an Exo-Methylene Substituent: Stereocontrolled Synthesis and Immunostimulation of Mouse and Human Lymphocytes,” submitted July 6, 2012.

Chen, Y.; Dubrovskiy, A.; Larock, R. C.*“Synthesis of Quinolines by Electrophilic Cyclization of N-(2-alkynyl)anilines: 3-Iodo-4-Phenylquinoline,” Org. Synth. 2012, 89, 294-306.

She, Z.; Niu, D.; Chen, L.; Gunawan, M. A.; Shanja, X.; Hersh, W. H.; Chen, Y.* “Synthesis of Trisubstituted Isoxazoles by Palladium(II)-Catalyzed Cascade Cyclization-Alkenylation of 2-Alkyn-1-one O-Methyl Oximes”, J. Org. Chem. 2012, 77, 3627−3633.

Yang, D.; Burugupalli, S.; Daniel, D.; Chen, Y.* “Microwave-Assisted One-Pot Synthesis of Isoquinolines, Furopyridines and Thienopyridines by Palladium-Catalyzed Sequential Coupling-Imination-Annulation of 2-Bromoarylaldehydes with Terminal Acetylenes and Ammonium Acetate”, J. Org. Chem. 2012, 77, 4466-4472.

L. Babukutty, E. Moskovic, D. Wadler, T. Strekas, and R. Engel, "Polycations. XX. New Monodentate Cationic Ligands and Their Coordination with Ruthenium for the Construction of Complexes Expressing Enhanced Interaction with DNA," Organic Chemistry International, Article ID 282137, Volume 2012.

G.W. Abbott, R. Engel, and J.I. Rizzo, “Methods for Modulating Ion Channels,” U.S. 8,143,254, 27 March 2012.

M. Cloninger and R. Engel, "Quaternary Ammonium Functionalized Glycodendrimers, Methods for the production and Use Thereof," 11 December 2012.

Luxi Li, Xianbo Shi, Cherice M. Evans and Gary L. Findley, Chapter 16.  Atomic and Molecular Low-n Rydberg States in Near Critical Point Fluids, in Advanced Aspects of Spectroscopy, M. A. Farrukh, ed. (InTech, 2012).

Yevgeniy Lushtak, C. M. Evans and G. L. Findley, The energy of the quasi-free electron in near critical point nitrogen, Chemical Physics Letters 564, 18 (2012).

Yevgeniy Lushtak, Samantha B. Dannenberg, C. M. Evans and G. L. Findley, Quasi-free electron energy in near critical point helium, Chemical Physics Letters 538, 46 (2012).

She, Z.; Niu, D.; Chen, L.; Gunawan, M. A.; Shanja, X.; Hersh, W. H.; Chen, Y. “Synthesis of Trisubstituted Isoxazoles by Palladium(II)-Catalyzed Cascade Cyclization–Alkenylation of 2-Alkyn-1-one O-Methyl Oximes,” J. Org. Chem. 2012, 77, 3627-3633.

Hersh, W. H.; Lam, S. T.; Moskovic, D. J.; Panagiotakis, A. J. “A Non-Karplus Effect: Evidence from Phosphorus Heterocycles and DFT Calculations of the Dependence of Vicinal Phosphorus-Hydrogen NMR Coupling Constants on Lone-Pair Conformation,” J. Org. Chem. 2012, 77, 4968-4979.

Seogjoo Jang, “Multistep quantum master equation theory for response functions in four wave mixing electronic spectroscopy of multichromophoric macromolecules,” Bulletin of the Korean Chemical Society (Invitational contribution for a special edition) 33, 997 (2012)

Lei Yang, Murali Devi, and Seogjoo Jang, “Polaronic quantum master equation theory of inelastic and coherent resonance energy tansfer for soft systems,” Journal of Chemical Physics 137, 024101 (2012)

Seogjoo Jang, “Nonadiabatic quantum Liouville and master equations in the adiabatic basis,” Journal of Chemical Physics (Invitation Contribution for a Special Issue on Nonadiabatic Dynamics) 137, 22A536 (2012)

Dibyendu Dana & Sanjai Kumar “Covalent Inhibitors of Protein Tyrosine Phosphatases”, Chemistry & Biology Interface, 2012, 2, 1, 1-11

Dibyendu Dana, Tirtha Kamal Das, Ish Kumar, Anibal Davalos Morinigo, Kevin J Mark, Daryl Ramai, Emmanuel J. Chang, Tanaji T. Talele, Sanjai Kumar “Design, Synthesis and Evaluation of 2-(Arylsulfonyl)oxiranes As Cell Permeable Covalent Inhibitors of Protein Tyrosine Phosphatases”, Chemical Biology and Drug Design, 2012, 80(4):489-99, *Cover page article

Yigang Fang, Fangwei Liu, and Jianbo Liu*, "Mass spectrometry study of negatively charged, gas-phase NaAOT micelles: How does charge states affect micellar structures and encapsulation?", J. Am. Soc. Mass Spectrom., 2012, DOI, 10.1007/s13361-012-0530-8.

Fangwei Liu, Yigang Fang, Yun Chen, and Jianbo Liu*, "Reactions of deprotonated tyrosine and tryptophan with electronically excited singlet molecular oxygen (a1Δg):  A guided-ion-beam scattering, statistical modeling and trajectory study", J. Phys. Chem. B, 2012, 116, 6369-6379.

A.J. Bard and M. V. Mirkin Eds. “Scanning Electrochemical Microscopy”, Marcel Dekker, N.Y., 2001; second edition CRC Press, Boca Raton, FL, 2012.

M. V. Mirkin and Y. Wang "Theory", in A. J. Bard and M. V. Mirkin (Eds.), Scanning Electrochemical Microscopy, 2nd Ed., CRC Press, Boca Raton, FL, 2012, pp. 75-125

M. V. Mirkin and M. Tsionsky  "Charge-Transfer Processes at the Liquid/Liquid Interface", in A. J. Bard and M. V. Mirkin (Eds.), Scanning Electrochemical Microscopy, 2nd Ed., CRC Press, Boca Raton, FL, 2012, pp. 191-232.

J. Velmurugan, J.-M. Noël, W. Nogala and M.V. Mirkin “Nucleation and Growth of Metal on Nanoelectrodes”, Chem. Sci. 2012, 3, 3307.

L. Huang, Y. Wang, M. V. Mirkin, B. Ren and D. Zhan “Electrochemical Synthesis of Silver-tetracyanoquinodimethane Microcrystals at Agar Supported Water/1,2-Dichloroethane Interface”, J. Electrochem. 2012, 18, 405-409. (invited article; special issue)

Y. Wang, J.-M. Noel, J. Velmurugan, W. Nogala, M. V. Mirkin, C. Lu, M. Guille Collignon, F. Lemaître and C. Amatore “Nanoelectrodes for Determination of Reactive Oxygen and Nitrogen Species inside Murine Macrophages”,  Proc. Natl. Acad. Sci. USA 2012, 109, 11534-11539. invited article; special issue)

W. Nogala, J. Velmurugan and M. V. Mirkin “Atomic Force Microscopy of Electrochemical Nanoelectrodes”, Anal. Chem. 2012, 84, 5192−5197.

X. Chen, X. Zhao, T.P. Abeyweera, and S.A. Rotenberg. “Analysis of substrates of protein kinase C isoforms in human breast cells by the traceable kinase method.”  Biochemistry 51: 7087-7097, 2012.

Samuni Y.; Samuni U.; Goldstein S., The mechanism underlying nitroxyl and nitric oxide formation from hydroxamic acids. Biochimica et Biophysica Acta (BBA) – General Subjects, 2012, 1820, 1560-1566.

Leslie Babukutty, Ethan Moskovic, Davina Wadler, Thomas Strekas, and Robert Engel; Polycations XX: New Monodentate Cationic Ligands and Their Coordination with Ruthenium for the Construction of Complexes Expressing Enhanced Interaction with DNA; Organic Chemistry International Volume 2012 (7 pages) (2012)



Computer Science

 

Boklan KD and TD Wooley), On Weyl Sums for Smaller Exponents, Functiones et Approximatio Commentarii Mathematici, 46 [1] (2012), 91-107

Liang Huang, Suphan Fayong, and Yang Guo (2012). Structured Perceptron with Inexact Search. 
In Proceedings of NAACL 2012 (North American Chapter of the Association of Computational Linguistics).  – one of the top 3 conferences in computational linguistics and natural language processing. Oral presentation with full 10-page paper in the proceedings (acceptance rate: 25%).

Ashish Vaswani, Liang Huang and David Chiang (2012). Smaller Alignment Models for Better Translations: Unsupervised Word Alignment with the L0-norm. 
In Proceedings of ACL 2012 (Annual Meeting of the Association of Computational Linguistics). – the top conference in computational linguistics and natural language processing. Oral presentation with full 10-page paper in the proceedings. (acceptance rate: 19%).

Matt Huenerfauth, Pengfei Lu. 2012. “Effect of Spatial Reference and Verb Infection on the Usability of American Sign Language Animations.” Universal Access in the Information Society: Volume 11, Issue 2 (June 2012), pages 169-184. doi: 10.1007/s10209-011-0247-7.

Pengfei Lu, Matt Huenerfauth. 2012. “Learning a Vector-Based Model of American Sign Language Inflecting Verbs from Motion-Capture Data.” In Proceedings of the Third Workshop on Speech and Language Processing for Assistive Technologies (SLPAT), The 2012 Conference of the North American Chapter of the Association for Computational Linguistics: Human Language Technologies (NAACL-HLT 2012), Montreal, Quebec, Canada. East Stroudsburg, PA: Association for Computational Linguistics, pages 66-74.

Pengfei Lu, Matt Huenerfauth. 2012. “CUNY American Sign Language Motion-Capture Corpus: First Release.” In Proceedings of the 5th Workshop on the Representation and Processing of Sign Languages: Interactions between Corpus and Lexicon, The 8th International Conference on Language Resources and Evaluation (LREC 2012), Istanbul, Turkey.

Heng Ji, Hongbo Deng and Jiawei Han. 2012. Uncertainty Reduction for Knowledge Discovery and Information Extraction on WWW. Invited Paper for IEEE Special Issue on Web-Scale Multimedia Processing and Applications (published during Centennial Year Celebration of IEEE Proceedings).

Qi Li, Javier Artiles, Taylor Cassidy and Heng Ji. 2012. Combining Flat and Structured Approaches for Temporal Slot Filling or: How Much to Compress?. Lecture Notes in Computer Science, 2012, Volume 7182/2012, 194-205.

Xiang Li, Heng Ji, Faisal Farooq, Hao Li, Wen-Pin Lin and Shipeng Yu. 2012. Rich Annotation Guided Learning. Invited Paper for International Journal On Advances in Intelligent Systems, v 5 n 3&4 2012

Herman, G.T., Kong, T.Y., and Oliveira, L.M., Provably robust simplification of component trees of multidimensional images, in: V.E. Brimkov and R.P. Barneva, Eds., Digital Geometry Algorithms: Theoretical Foundations and Applications to Computational Imaging, Springer,Dordrecht, 2012, pp. 27 – 69.   DOI: http://dx.doi.org/10.1007/978-94-007-4174-4_2

Herman, G.T., Kong, T.Y., and Oliveira, L.M., Tree representation of digital picture embeddings, Journal of Visual Communication and Image Representation, Vol. 23, 2012, pp. 883 – 891. DOI: http://dx.doi.org/10.1016/j.jvcir.2012.05.007

Rosenberg, A. “Rethinking the Corpus: Moving towards Dynamic Linguistic Resources”, Interspeech 2012

Rosenberg, A. “Classifying Skewed Data: Importance Weighting to Optimize Average Recall”, Interspeech 2012

Rosenberg, A., Fernandez R., and Ramabhadran, B. “Prosody Modeling for Phrase Boundary Assignment from Text in Multiple Domains”, Interspeech 2012

Rosenberg, A. “Using Prominence and Phrasing Predictions to Improve Weighted Dictionary Pronunciation Models”, Interspeech 2012

Maskey, S., and Rosenberg, A. “Power mean Pyramid Scores for Summarization Evaluation”, Interspeech 2012

Kaplan, I., and Rosenberg, A. “Analysis of Speech Transcripts to Predict Winners of Presidential and Vice-Presidential Debates”, IEEE SLT 2012

Rosenberg, A. “Modeling Intensity Contours and the Interaction between Pitch and Intensity to Improve Automatic Prosodic Event Detection and Classification”, IEEE SLT 2012

Rosenberg, A., Cooper, E., Levitan, R., and Hirschberg, J. “Cross-Language Prominence Detection”, Speech Prosody 2012.

Rosenberg, A. “Generating Prosodic Contours for Synthesized Speech” filed 11/14/2008, granted 11/27/2012 (with M. Jansche, M. Riley and T. Tai)

Ryba, A., The Pascal Mysticum Demystified, (with John H. Conway) The Mathematical Intelligencer, Volume 34, Number 3, Pages 4--8, 2012.

Sy, B., “Generation of Cryptographic Keys from Personal Biometrics: An Illustration based on Fingerprints,”(with Arun P. Kumara Krishnan), a contributing article to New Trends and Developments in Biometrics, ISBN 980-953-307-576-6, InTech, 2012.

Changhe Yuan, Brandon Maone. An Improved Admissible Heuristic for Learning Optimal Bayesian Networks. In Proceedings of the 28th Conference on Uncertainty in Artificial Intelligence (UAI-12). Pages 924-933. Catalina Island, CA. 2012.

Brandon Malone, Changhe Yuan. A Parallel, Anytime, Bounded Error Algorithm for Exact Bayesian Network Structure Learning. In Proceedings of the Sixth European Workshop on Probabilistic Graphical Models (PGM-12). Granada, Spain. 2012.

Arindam Khaled, Changhe Yuan, Eric Hansen. Solving Limited Memory Influence Diagrams Using Branch-and-Bound Search. In Proceedings of the International Symposium on Artificial Intelligence and Mathematics (ISAIM-12).

Zhifa Liu, Changhe Yuan, Stephen Pruett. Machine Learning Analysis of the Relationship between Changes in Immunological Parameters and Changes in Resistance to Listeria monocytogenes: A New Approach for Risk Assessment and Systems Immunology. Toxicological sciences. 2012.

Zhifa Liu, Brandon Malone, Changhe Yuan. Empirical Evaluation of Scoring Functions for Bayesian Network Model Selection. BMC Bioinformatics. 2012.

 

Earth & Environmental Sciences

 

Throckmorton, H., J.A. Bird, L. Dane, M.K. Firestone, W.R. Horwath. 2012. The source of microbial C has little impact on soil organic matter stabilization in forest ecosystems. Ecology Letters 15:1257–1265 doi. 10.1111/j1461-0248. 2012.01848.x

Chatterjee, S., F. Santos, S. Abiven, B. Itin, R. Stark, J.A. Bird. 2012. Elucidating the chemical structure of pyrogenic organic matter by combining magnetic resonance, midinfrared spectroscopy and mass spectrometry. Organic Geochemistry 51:35–44. doi. 10.1016/j.orggeochem.2012.07.006

Santos, F., M.S. Torn, J.A. Bird. 2012. Biological degradation of pyrogenic organic matter in temperate forest soils. Soil Biology & Biochemistry 51:115-124. doi.10.1016/j.soilbio. 2012.04.005

Coch, N.K.2012, Now is not the time for multiple surge barriers. in N.Y. Harbor. Journal of Coastal Research, v. 28 no.2; P. 324-331

Coch, N.K. 2012, Hurricane Irene-A Hydrological Disaster in the Northeast, The Professional Geologist (AIPG),Sept / Oct. p.47-52

Penman, D.F., Hönisch, Rasbury, E.T., Hemming, N.G., Spero, H.J., 2012, Boron, carbon, and oxygen isotopic composition of brachiopod shells: Intra-shell variability, controls, and potential as a paleo-pH recorder, J. Chemical Geology.

Yi C, Rustic G, Xu X, Wang J, Dookie A, Wei S, Hendrey G, Ricciuto D, Meyers T, Nagy Z, Pinter K. 2012. Climate extremes and grassland potential productivity. Environmental Research Letters 3:035703.

Ludman, Allan, and Hopeck, John, 2012, Revised geologic map of east-central Maine (Calais, Danforth, Millinocket, and Lincoln 1:100,000 quadrangles; Maine Geological Survey Progress Map Series #1.

Manowitz A, Sedlar, M, Miller A., Miller J, Markowitz S. Use of BMI guidelines and individual dose tracking to minimize radiation exposure from low-dose helical chest CT scanning in a lung cancer screening program. Acad Radiol. 2012;19(1):84-88.

Kim, H., Herbert, R., Landrigan, P., Markowitz, S., Moline, J., Savitz, D., Todd, A., Udasin, I., Wisnivesky, J. Increased Rates of Asthma among World Trade Center Disaster Responders. Am J Ind Med. 2012; 55(1):44-53.

Morabia A, Zhang FF, Kappil MA, Flory J, Mirer FE, Santella RM, Wolff M, Markowitz SB. Biologic and epigenetic impact of commuting to work by car or using public transportation: A case-control study. Prev Med. 2012;54(3-4):229-33.

McHugh, C. M., Seeber, L., Cagatay, M. N., Henry, P., Sorlien, C., Steckler, M., Ucarkus, G.. 2012. Continental Transform Boundaries: Tectonic Evolution and Geohazards. Scientific Drilling Journal 13. Pages 60-64.

Shillington, D.J., Seeber, L., Sorlien, C.C., Steckler, M.S., Kurt, H., Dondurur, D., Cifici, G., Cormier, M.-H., McHugh, C.M.G., Gurcay, S., Poyraz, D., Okay, S., Atgin, O., Diebold, J. B., 2012. Evidence for widespread creep on the flanks of the Sea of Marmara Transform basin from marine geophysical data. Geology 40, p 439-442.

Ryan, W. B. F., Vachtman, D., McHugh, C., Cagatay, N., Mart, Y., 2012. A channeled shelf fan initiated by flooding of The Black Sea. In “The Mediterranean Sea: Its History and Present Challenges”. Chapter 3. Editors Stefano Goffredo and Zvy Dubnisky.

MORABIA A. La convergence historique de l’épidémiologie et de la médecine clinique, de Pierre Louis à l’AMBRE. In: Anne Fagot-Largeault, ed. L’émergence de la médecine scientifique, Paris, éditions Matériologiques, 2012.

MORABIA A. Cross-sectional study: Primary care physicians surveyed in this study mistakenly interpreted improved survival and increased detection with screening as evidence that screening saves lives Evid Based Med ebmed-2012-100721Published Online First: 7 July 2012

MORABIA A. ZHANG FF, KAPPIL MA, FLORY J, MIRER F, SANTELLA RM, WOLFF M, MARKOWITZ, SB. Biologic and epigenetic impact of commuting to work by car or using public transportation: a case-control study. Prev Med 2012; 54(3-4):229-33. PMID: 22313796

COSTANZA MC, BEER-BORST S, JAMES RW, GASPOZ JM, MORABIA A. Consistency between cross-sectional and longitudinal SNP:blood lipid associations. Eur J Epidemiol 2012; 27(2):131-8

ZHANG FF, SANTELLA, RM, WOLFF M, KAPPIL MA, MARKOWITZ, SB, MORABIA A. White blood cell global methylation and IL-6 promoter methylation in association with diet and lifestyle risk factors in a cancer-free population. Epigenetics 2012;7(6):606-14. PMID: 22531363

MORABIA A. Quality, originality, and significance of the 1939 “Tobacco consumption and lung carcinoma” article by Mueller, including translation of a section of the paper. Prev Med 2012 Sep;55(3):171-7. Epub 2012 May 24.

MORABIA A; COSTANZA MC. WEBCAM: Western evidence-based complementary and alternative medicine. Prev Med 2012;54(1):1-2.

MORABIA A; COSTANZA MC. Pedometers for all. Prev Med 2012;54(2):111

MORABIA A; COSTANZA MC. Obesity, TV commercials, passive commuting, and smoking. Prev Med 2012;54(3-4): 181-182

MORABIA A; COSTANZA MC. Population Health Intervention Research (PHIR): Should we fear the “P”? Prev Med 2012;54(5): 291-292.

MORABIA A; COSTANZA MC. Handwashing against hospitalization for influenza: Time for PHIR? Prev Med 2012;54(6): 369-370.

MORABIA A; COSTANZA MC. Financial incentives and health: Revealing the submerged side of the iceberg. Prev Med 2012;55(supp): S1.

MORABIA A; COSTANZA MC. Is bike-sharing unegalitarian? Prev Med 2012;55(1): 1-2.

MORABIA A; COSTANZA MC. Could Chinese herbal medicine be nephrotoxic? Prev Med 2012;55(2): 85-86.

MORABIA A; COSTANZA MC. Piling up healthy behaviors. Prev Med 2012;55(3): 161-162

MORABIA A; COSTANZA MC. Evidence-based gun control. Prev Med 2012;55(4): 261.

MORABIA A; COSTANZA MC. Culture(s). Prev Med 2012;55(5): 351-352.

MORABIA A; COSTANZA MC. The future of preventive medicine/Preventive Medicine. Prev Med 2012;55(6): 529-530.

Dueker, M.E., G. O’Mullan, A. Juhl, K. Weathers,. and M. Uriarte. 2012. Local environmental pollution strongly influences culturable bacterial aerosols at an urban aquatic superfund site.  Environmental Science and Technology 46(20):10926-10933.

Dueker, M.E., G. O’Mullan, K. Weathers, A. Juhl. and M. Uriarte. 2012. Coupling of fog and marine microbial content in the near shore coastal environment”; Biogeosciences 9: 803-813

Brown, T. (lead author of report); study conducted by J. Liscomb, A. Juhl, and G. O’Mullan; report editors: Lipscomb, Juhl, and O’Mullan. 2012. “How is the water?  Sewage Contamination in the Hudson River Estuary 2006-2011”. Available for download\:  http://www.riverkeeper.org/wp-content/uploads/2012/12/RvK_How-Is-the-Water-2012.pdf

Rouff A.A. 2012 Sorption of Chromium with Struvite During Phosphorus Recovery. Environmental Science & Technology, 46, 12493–12501. doi: 10.1021/es302296m.

Ma, N. and A.A. Rouff 2012 The Influence of pH and Oxidation State on the Interaction of Arsenic with Struvite During Mineral Formation. Environmental Science & Technology, 46, 8791-8798. doi: 10.1021/es300864t

Rouff A.A., B.L. Phillips, S.G. Cochiara and K.L. Nagy. 2012 The Effect of Dissolved Humic Acids on Aluminosilicate Formation and Associated Carbon Sequestration. Applied and Environmental Soil Science, Article ID 430354, 12p. doi:10.1155/2012/430354

Rouff A.A. 2012 The use of TG/DSC–FT-IR to Assess the Effect of Cr Sorption on Struvite Stability and Composition. Journal of Thermal Analysis and Calorimetry, 110, 1217-1223. doi: 10.1007/s10973-011-2101-9.

T. Church, Rigaud S., Baskaran M., Kumar A., Friedrich, J., Masque, P., Puigcorbe V., Kim, G., Radakovitch, O., Hong G., Choi, H-Y.,Stewart G. (2012) Intercalibration studies of 210Po and particulate seawater sample. Limnology and Oceanography Methods 10: 776-789

Rice, E.J., Panzeca, C., Stewart G.M. (2012) Temperature-induced microbubbles within naturalmarine samples may inflate small-particle counts in a Coulter Counter. Marine Ecology Progress Series doi: 10.3354/meps09513

Seebaugh DR, Wallace WG, L’Amoreaux WJ, Stewart GM (2012)Assimilation of elements and digestion in grass shrimp pre-exposed to dietary mercury. Archives of Environmental Contamination and Toxicology doi 10.1007/s00244-012-9760-9

Xu, X., C. Yi, the influence of geometry on recirculation and co2 transport over forested hills, Meteorology and Atmospheric Physics, DOI: 10.1007/s00703-012-0224-6, 2012.

Yi, C., G. Rustic, X. Xu, J. Wang, A. Dookies, S. Wei, G. Hendrey, D. M. Ricciuto, T. Meyers, Z. Nagy, K. Pinter, Climate extremes and grassland potential productivity, Environmental Research Letters, 7, 035703 (6pp) doi:10.1088/1748-9326/7/3/035703, 2012.

Wang, W. and C. Yi, A new nonlinear analytical model for canopy flow over a forested hill, Theoretical and Applied Climatology, DOI 10.1007/s00704-012-0599-9, 2012.

Chen, H., and C. Yi, Optimal control of katabatic flows within canopies, Quarterly Journal of the Royal Meteorological Society, DOI:10.1002/qj.1904, 2012.

Jung, H.B.*, Yun, S.T., Kwon, J.S., Zheng, Y. (2012) Role of iron colloids in copper speciation during neutralization in a coastal acid mine drainage, South Korea: Insight from voltammetric analyses and surface complexation modeling.  Journal of Geochemical Exploration, 112:244-251.

He, Y.*, C. Pedigo, B. Lam, Z. Cheng and Y. Zheng (2012) Bioaccessibility of arsenic in various types of rice in an in vitro gastrointestinal fluid system. Journal of Environmental Science and Health, Part B, 47:74-80.

Jung, H.B., B. Bostick, Y. Zheng*. (2012) Field, Experimental, and Modeling Study of Arsenic Partitioning across a Redox Transition in a Bangladesh Aquifer. Environ. Sci. Tech. 46 (3), 1388-1395.

Yang, Q., H.B.Jung, R. G. Marvinney,; C. W. Culbertson and Y. Zheng*. (2012) Can arsenic occurrence rate in bedrock aquifers be predicted? Environ. Sci. Tech. 46 (4), 2080-2087.

Legg, T.*, Y. Zheng,  B. Simone, K. A. Radloff, N. Mladenov, A/ González Peña, D. Knights, H. Siu, M. Mo. Rahman, K. M. Ahmed, D. M. McKnight, D. R. Nemergut. (2012). Carbon, metals and grain size correlate with bacterial community composition in sediments of a high arsenic aquifer. Frontiers in Terrestial Microbiology, 3(82), 23

George CM*, Zheng Y, Graziano JH, Hossain Z, Rasul SB, Mey JL, et al. Evaluation of an arsenic test kit for rapid well screening in Bangladesh. Environ Sci Technol 2012. 46(20), 11213-11219

Flanagan, S.V., Jonston, R.B and Zheng, Y.* 2012. Arsenic in tube well water in Bangladesh: health and economic impacts and implications for arsenic mitigation, Bulletin of WHO, 90(11), 839-846.

 

Family, Nutrition and Exercise Sciences

 

Phillips, S.R., & Bernstein, E. (2012) Competitive activities in physical education: How do students perceive fun?  Physical Educator,45, 19-21.

Silverman, S., & Bernstein, E. (2012).  What counts as good research.; In Kathy Armour & Doune Macdonald (eds.), Research methods in physical education and youth sport (pp. 40-51).  London: Routledge

Malin, S.K., Nightingale, J., Choi, S.E., Chipkin, S.R., Braun, B. (2012). Metformin modifies the exercise training effects on risk factors for cardiovascular disease in impaired glucose tolerant adults. Obesity (Silver Spring), May 25, Doi: 10. 1038/oby.2012.133.

Manson, M. and Herman, A. (2012). Smart PE Moves for Middle School Students. National Association for Sport and Physical Education. Reston, VA.

Hung, YC, Enderson, E, Akbasheva, F, Valte L, Ke, WS, Gordon AM (2012). Planning and coordination of a reach-grasp-eat task in children with hemiplegia. Research in Developmental Disabilities, 33(5), 1649-57. doi: 10.1016/j.ridd.2012.04.003.

Gill, SV, Hung YC (2012) Influence of Weight Classification on Children Stepping Over Obstacles. American Journal of Physical Medicine & Rehabilitation, 91(7), 625-30. doi: 10.1097/PHM.0b013e31824fa81e

Lubman N*, Doak C, Jasti S. Food Label Use and Food Label Skills among Immigrants from the Former Soviet Union. J Nutr Educ Behav. 2012 Sep;44(5):398-406.

Kant AK, Graubard BI, Mattes RD. Association of food form with self-reported 24-h energy intake and meal patterns in US adults: NHANES 2003-2008. Am J Clin Nutr. 2012 Dec;96(6):1369-78. doi: 10.3945/ajcn.112.044974. Epub 2012 Oct 24. PubMed PMID: 23097271; PubMed Central PMCID: PMC3497926.

Kant AK, Graubard BI. Race-ethnic, family income, and education differentials in nutritional and lipid biomarkers in US children and adolescents: NHANES 2003-2006. Am J Clin Nutr. 2012 Sep;96(3):601-12. doi: 10.3945/ajcn.112.035535. Epub 2012 Jul 25. PubMed PMID: 22836030; PubMed Central PMCID: PMC3417217.

Miner, P, Shimonova, L., Khaimov, A., Borukhova, Y., Ilyayeva, E., Ranaldi, R. & Bodnar, R. (2012). General, kappa, delta and mu opioid receptor antagonists mediate feeding elicited by the GABA-B agonist baclofen in the ventral tegmental area and nucleus accumbens shell in rats: reciprocal and regional interactions. BrainResearch, 1443, 34-51.

Mosenson, J. & Mosenson, A. (2012). Career changers’ journey into education. Techniques. 87(3), 8-9.

Taylor, A. Robila, M. & Fisackerly, B. (2012). Theory use in stepfamilies research. In M. Fine & F. D. Fincham, (Eds.), Family Theories: A Content-based Approach. New York, NY: Routledge.

Robila, M. & Akinsulure-Smith, A. (2012). Psychological Ethics and Immigration. In Leach, M., Ferrero, A., Korkut, Y., Lindsay, G. & Stevens, M. (Eds.), Oxford International Handbook of Psychological Ethics. Oxford, UK: Oxford Univ. Press.

Robila, M. (2012). Family Policies in International Perspectives. Journal of Child and Family Studies Special Section Editorial, 21(1), 1-3.

Robila, M. (2012). Family Policies in Eastern Europe: A Focus on Parental Leave. Journal of Child and Family Studies, 21(1), 32-41

Robila, M. (2012). Family Policies in International Perspectives. Journal of Child andFamily Studies Special Section, 21(1). It includes 12 peer-reviewed articles.

 

Mathematics

 

Mark D. Baker, A. David Baker, Jane Belanger,Christopher R. H. Hanusa, and Alana Michaels. Linear relationship between weighted-average Madelung constants and density functional theory energies for MgO nanotubes.Journal of Physical Chemistry C. Volume 116(48), pp 25588–25593. (2012)

Christopher R. H. Hanusa and Brant C. Jones.  Abacus models for parabolic quotients of affine Weyl groups.  Journal of Algebra. Volume 361, pp 134–162. (2012)

Jiang, Y., Quasiconformal Mappings, Riemann Surfaces, and Teichmüller Spaces (with Sudeb Mitra).  Contemporary Mathematics Series, American Mathematics Society, Vol. 575, 2012, 375 pp., ISBN-10: 0-8218-5340-6, ISBN-13: 978-0-8218-5340-5.

Jiang, Y., Extending holomorphic motions and monodromy (with Michael Beck, Sudeb Mitra, and Hiroshige Shiga). Annales Academiæ Scientiarum Fennicæ Mathematica, Vol. 37 (2012), 53-67.

Jiang, Y., Quasiconformal motions and isomorphisms of continuous families of Mobius groups (with Sudeb Mitra and Hiroshige Shiga). Israel Journal of Mathematics, 188 (2012), 177–194.

Jiang, Y., Symmetric invariant measures. Contemporary Mathematics, AMS, Vol. 575, 2012, 211-218.

Jiang, Y., Douady-Earle section, holomorphic motions, and some applications (with Sudeb Mitra). Contemporary Mathematics, AMS, Vol. 575, 2012, 219-252.

Jiang, Y., Normal families and holomorphic motions over infinite dimensional parameter spaces (with Michael Beck and Sudeb Mitra). Contemporary Mathematics, AMS, Vol. 573, 2012, 1-10.

Jiang, Y., Circle endomorphisms, dual circles and Thompson’s group (with Frederick P. Gardiner). Contemporary Mathematics, AMS, Vol. 573, 2012, 99-118.

Jiang, Y., A gluing theorem for quasiconformal mappings (with Yi Qi). Kodai Mathematical Journal, 35 (2012), 415–424.

Kahan, S., “Fair Game”, Mathematics Teacher,105(6),February 2012,p. 407

Kahan, S., “Happy Families”(with Dave Miller) Mathematics Teacher, 105(9), May 2012, pp. 646-47

Kahan, S., “Consecutive Prime Sums From 2000 to 2099” Journal of Recreational Mathematics,37(2), 2008, pp. 114-18 (appeared in 2012.)

Kramer, K. and A. Brumer, Arithmetic of Division Fields, Proc. Amer. Math. Soc. 140 (2012), 2981-2995.

Dan A. Lee and Christina Sormani, Near-Equality of the Penrose Inequality for Rotationally Symmetric Riemannian Manifolds. Annales Henri Poincare, 13 (2012) no. 7, 1537-1556.

Miller, R., The Hierarchy of Equivalence Relations on the Natural Numbers Under Computable Reducibility, with S. Coskey & J.D. Hamkins, Computability 1 (2012) 15-38.

Miller, R., Degree Spectra of Highn and Non-lown Degrees, with A. Frolov, V. Harizanov, I. Kalimullin, & O. Kudinov, Journal of Logic and Computation 22 (2012) 4, 755-777.

Mitra, S., and Y. Jiang. Co-editors, “Quasiconformal mappings, Riemann surfaces, and Teichmuller spaces,” Contemporary Mathematics; American Mathematical Society; Volume 575, 2012 (375 pages).

Mitra, S., “Quasiconformal motions and isomorphisms of continuous families of Mobius groups,” (with Yunping Jiang and Hiroshige Shiga), Israel Journal of Mathematics, Vol. 188, 2012, 177-194.

Mitra, S., “Extending holomorphic motions and monodromy,” (with Michael Beck, Yunping Jiang, and Hiroshige Shiga). Annales Academiae Scientiarum Fennicae Mathematica, Vol. 37, 2012, 53-67.

Mitra, S., “Douady-Earle section, holomorphic motions and applications,” (with Yunping Jiang); Contemporary Mathematics; American Mathematical Society; Vol. 575, 2012; 219-251.

Mitra, S., “Normal families and holomorphic motions over infinite dimensional parameter spaces,” (with Michael Beck and Yunping Jiang); Contemporary Mathematics; American Mathematical Society; Vol. 573; 2012, 1-9.

Ralescu, S., “The Windings of a Deal”, The Bridge World, Vol. 83, No. 4, pp. 40-43, 2012

Ralescu, S., “Do You Overruff ?”, The Bridge World, Vol. 83, No. 6, pp. 23-26, 2012

Ralescu, S., “Decompression Plays” (with Barry Rigal), The Bridge World, Vol. 83, No. 8, pp. 14-20, 2012 (also, translated in Turkish, TBW)

Ralescu, S., “Around the Block”, The Bridge World, Vol. 83, No.12, pp. 24-29, 2012

Ralescu, S., “To Finesse or Not to Finesse”, The Bridge World, Vol.84, No. 3, pp. 24-29, 2012

Ralescu, S., “Asymptotic theorems for kernel U-quantiles”, Electronic Journal of Statistics, no. 2012, pp. 664-671, 2012

Sabitova M.,  Simplification of root valuation data for classical groups, Algebras and Representation Theory, V. 15, Issue 4 (2012), P. 715-733.

Francis Bonahon, Robert L. Devaney, Frederick P. Gardiner and Dragomir Šarić (Editors). Conformal dynamics and hyperbolic geometry. Proceedings of the conference in honor of Linda Keen's 70th birthday held at the Graduate School and University Center of CUNY, New York, October 21–23, 2010. Contemporary Mathematics, 573. American Mathematical Society, Providence, RI, 2012.

Chamanara, Reza; Šarić, Dragomir Elementary moves and the modular group of the compact solenoid. Conformal dynamics and hyperbolic geometry, 11–33, Contemp. Math., 573, Amer. Math. Soc., Providence, RI, 2012.

Bonahon, Francis; Šarić, Dragomir Infinitesimal Liouville currents, cross-ratios and intersection numbers. J. Topol. 5 (2012), no. 1, 213–225.

Sultan, A., Implementing Common Core Standards Through Problem Solving, (with Alice Artzt and Theresa Gurl), NCTM, Reston Virginia, 2012

Sultan, A., A capstone mathematics course for prospective secondary mathematics teachers, (with Alice Artzt and Fran Curcio) Journal of Mathematics Teacher Education: Volume 15, Issue 3 (2012), Page 251-262

Wilson S., Equivariant holonomy for bundles and abelian gerbes, with T. Tradler and M. Zeinalian, Comm. Math. Phys., Vol. 315, Issue 1, 2012, pg 38-108.

 

Physics

 

Fred J. Cadieu, U. S. Provisional Pat. SN: 61/673,046, Memistor Type Hysteretic Current Versus Voltage Curves, With Large Light Response, Obtained from HfO2-Hf Diffused Nanometer Film Layers, Inventor: July 18, 2012.

F. J. Cadieu, I. Vander, Y. Rong, and R. W. Zuneska, X-Ray Measurements of Nanometer Thick Ta­xO1-x and Hf1-xOx Films on Silicon Substrates for Thickness and Composition Determination, Advances in X-Ray Analysis, Vol. 55 (2012).

B. Roy, H. Li, S. Dhomkar, F. J. Cadieu, L. Peng, R. Moug, M. C. Tamargo, and I. L. Kuskovsky, Determination of excitonic size with sub-nanometer precision via excitonic Aharonov-Bohm effect in type-II quantum dots, Appl. Phys. Lett. 100, 213114 (2012).

F. J. Cadieu, I. Vander, Y. Rong, and R. W. Zuneska, X-ray measurements of nanometer-thick tantalum oxide and hafnium oxide films on silicon substrates for thickness and composition determination, Powder Diffraction 27, 87-91 (2012).

B. Roy, H. Ji, S. Dhomkar, F.J. Cadieu, L. Peng, R. Moug, M.C. Tamargo, Y. Kim, D. Smirnov, and I.L. Kuskovsky, Enhancement and Narrowing of the Aharnov-Bohm Oscillations Due to Built-In Electric Field in Stacked Type-II ZnTe/ZnSe Quantum Dots: Spectral Analysis, Phys. Rev. B 86, 165310 (2012).

Z. Shi and A. Z. Genack, “Transmission Eigenvalues and the Bare Conductance in the Crossover to Anderson Localization,” Phys. Rev. Lett. 108, 043901 (2012).

M. Davy, Z. Shi and A. Z. Genack, “Focusing through random media: eigenchannel participation number and intensity correlation,” Phys. Rev. B 85, 035105 (2012).

J. Wang, Z. Shi, M. Davy and A. Z. Genack, “Wave propagation and localization via quasi-normal modes and transmission eigenchannels,” Int. J. Mod. Phys. Conf. Ser. 11, 1 (2012).

B. Roy, H. Ji, S. Dhomkar, F. J. Cadieu, L. Peng, R. Moug, M. C. Tamargo, Y. Kim, D. Smirnov, and I. L. Kuskovsky, Enhancement and Narrowing of the Aharonov-Bohm Oscillations due to Built-in Electric Field in Stacked Type-II ZnTe/ZnSe Quantum Dots: Spectral Analysis, Phys. Rev. B 86, 165310 (2012)

B. Roy, H. Ji, S. Dhomkar, F. J. Cadieu, L. Peng, R. Moug, M. C. Tamargo, and I. L. Kuskovsky, Determination of excitonic size with sub-nanometer precision via excitonic Aharonov-Bohm effect in type-II quantum dots, Appl. Phys. Lett. 100, 213114 (2012).

U. Manna, I. C. Noyan, Q. Zhang, I. F. Salakhutdinov, K. A. Dunn, S. W. Novak, R. Moug, M. C. Tamargo, G. F. Neumark and I. L. Kuskovsky, Structural properties and spatial ordering in multilayered ZnMgTe/ZnSe type-II quantum dot structures, J. Appl. Phys., 111, 033516-033517 (2012).

U. Manna, Q. Zhang, S. Dhomkar, I. F. Salakhutdinov, M. C. Tamargo, I. C. Noyan, G. F. Neumark and I. L. Kuskovsky, Radiative transitions in stacked type-II ZnMgTe quantum dots embedded in ZnSe, J. Appl. Phys., 112, 063521-063511 (2012).

A. Rojas-Pacheco, B. Obregon-Quintana, L. S. Liebovitch, L. Guzman-Vargas. 2012. Time-delay effects on dynamics of a two-actor conflict model. Physica A392:458-467. http://dx.doi.org/10.1016/j.physa.2012.09.021.

E. S. Andrianov, A. A. Pukhov, A. V. Dorofeenko, A. P. Vinogradov, and A. A. Lisyansky,Rabi oscillations in spasers during non-radiative plasmon excitation, Phys. Rev. B, 85, 035405 (2012).

E. S. Andrianov, A. A. Pukhov, A. V. Dorofeenko, A. P. Vinogradov, and A. A. Lisyansky Stationary behavior of a chain of interacting spasers, Phys. Rev. B, 85, 165419 (2012).

E. S. Andrianov, A. A. Pukhov, A. V. Dorofeenko, A. P. Vinogradov, and A. A. Lisyansky Switching waves and dissipative structures in a chain of spasers, Quantum Electronics, 47, 834-838 (2012).

A.A. Lisyansky, E.S. Andrianov, A.V. Dorofeenko, A.A. Pukhov, and A.P. Vinogradov, Forced Spaser Oscillations, Proc. SPIE, 8457, 84570X-1-16 (2012).

A.P. Vinogradov, E.S. Andrianov, A.A. Pukhov, A.V. Dorofeenko, and A.A. Lisyansky, Using Spaser-Effect For Loss Comensation in Metamaterials, AIP Conf. Proc., 1475, 92-94 (2012).

E.S. Andrianov, A.A. Pukhov, A.P. Vinogradov, A.V. Dorofeenko, and A.A. LisyanskySpaser Chains, AIP Conf. Proc., 1475, 104-106 (2012).

Baranov D. G., E.S. Andrianov, A.P. Vinogradov, and A.A. Lisyansky Exactly Solvable Toy Model for SPASER, AIP Conf. Proc., 1475, 110-112 (2012)

A.A. Pukhov, E.S. Andrianov, A.P. Vinogradov, A.V. Dorofeenko, and A.A. Lisyansky Optical Bistability in Spaser Chains, AIP Conf. Proc., 1475, 155-157 (2012).

A.A. Zyablovsky, A.V. Dorofeenko, A.P. Vinogradov, E.S. Andrianov, A.A. Pukhov, and A.A. LisyanskySupperradiance and Synchronization of 2D Spaser Array, AIP Conf. Proc., 1475, 185-187 (2012).

V. Shuvayev, V. Menon, A. Lisyansky, and L. Deych About possibility of bistable dynamics in lasers with single-mode cavities, J. Opt. Soc. Am. B, 30, 87–94 (2013).

H. N. S. Krishnamoorthy, Z. Jacob, E. Narimanov, I. Kretzschmar, and V. M. Menon, “Topological transitions in metamaterials,” Science 336, 205 (2012).

S. Husaini, H. Teng, and V. M. Menon, “Enhanced nonlinear response of metal nanocomposite based photonic crystals,” Appl. Phys. Lett. 101,111103 (2012).

S. Chatterjee, J. B. Lee, N. Valappil, D. Luo, and V. M. Menon, “Probing Y-shaped DNA structure with time resolved FRET," Nanoscale 4, 1568 (2012).

G. John, S. Jadhav, V. M. Menon, and V. T. John, “Flexible optics – Recent developments in molecular gels,” Angew. Chem. 51, 1760 (2012).

Menon, V.M., “Flexible microcavity structure made of organic materials using spin coating technique and method of making,” V. M. Menon, and N. Valappil, US Patent # 8135052 March 13, 2012.

Y. Yoon, M.-G. Kang, T. Morimoto, M. Kida, N. Aoki, J. L. Reno, Y. Ochiai, L. Mourokh, J. Fransson, and J. P. Bird, Coupling quantum states through the continuum: a mesoscopic multi-state Fano resonance, Phys. Rev. X 2, 021003 (2012).

S. Ishmail, P. Ivanushkin, and L. Mourokh, Proton transport through D- and H-channels in the bovine heart cytochrome c oxidase, Phys. Scr. T151, 014069 (2012).

L. Mourokh, P. Ivanushkin, Y. Yoon, N. Aoki, Y. Ochiai, and J. P. Bird, Multi-continuum Fano resonance in coupled quantum point contacts: A manifestation of the “integral” Fano formula, J. Appl. Phys. 112, 103704 (2012).

M. Kang, J. Chen, B. Gu, Y. Li, L. T. Vuong, and H.-T. Wang, "Spatial splitting of spin states in subwavelength metallic microstructures via partial conversion of spin-to-orbital angular momentum" Phys. Rev. A85, 035801 (2012).

N. D. Singh, M. Moocarme, N. Punnoose, B. Edelstein, and L.T. Vuong, "Anomalously-large photo-induced magnetic response of metallic nanocolloids in aqueous solution using a solar simulator" Opt. Express 20, 19214 (2012).

 

Psychology

 

Taylor, M. & Alvero, A. M. (2012). The Effects of Safety Discrimination Training and Frequent Safety Observations. Journal of Organizational Behavior Management, 32(3) 169-193.

Berkovits, M. S, Sturmey, P. & Alvero, A. M. (2012). Effects of Individual and Group Contingency Interventions on Attendance in Adolescent Part-time Employees. Journal of Organizational Behavior Management, 32(2) 152-161.

Pinhas A, M Aviel, M Koen, S Gurgov, V Acosta, M Israel, L Kakuriev, E Guskova, I Fuzailov, K Touzani, A Sclafani and RJ Bodnar. Strain differences in sucrose- and fructose-conditioned flavor preferences in mice. Physiol Behav 105: 451-459, 2012.

Miner P, L Shimonova, A Khaimov, Y Borukhova, E Ilyayeva, R Ranaldi and RJ Bodnar. General, kappa, delta and mu opioid receptors mediate feeding elicited by the GABA-B agonist baclofen in the ventral tegmental area and nucleus accumbens shell in rats: reciprocal and regional interactions. Brain Res 1443: 34-51, 2012.

Dela Cruz, J, DP Icaza-Cukali, H Tayabali, V Galanopoulos, C Sampson, D Bamshad, K Touzani, A Sclafani and RJ Bodnar. Roles of dopamine D1 and D2 receptors in the acquisition and expression of fat-conditioned flavor preferences in rats. Neurobiol Learn Mem 97: 332-337, 2012.

Malkusz DC, T Banakos, A Mohamed, T Vongwattanakit, G Malkusz, S Saeed, S Martinez, T Bohn, F Mahmud, C Liss, A Rozvi, K Touzani, A Sclafani and RJ Bodnar. Dopamine signaling in the medial prefrontal cortex and amygdala is required for the acquisition of fructose-conditioned flavor preferences in rats. Behav Brain Res 233: 500-507, 2012.

Dym, CT, T Kraft, V Bae, Y Yakubov, K Touzani, A Sclafani and RJ Bodnar. Double dissociation of D1 and opioid receptor antagonism effects on the acquisition of sucrose-conditioned flavor preferences in BALB/c and SWR mice. Pharmacol Biochem Behav 103: 26-32, 2012.

Bodnar, RJ. Endogenous opiates and behavior: 2011. Peptides 38: 463-522, 2012.

Dela Cruz, J, VS Bae, DP Icaza-Cukali, C Sampson, D Bamshad, A Samra, S Singh, N Khalifa , K Touzani, A Sclafani and RJ Bodnar. Critical role of NMDA but not opioid receptors in the acquisition of fat-conditioned flavor preferences in rats. Neurobiol Learn Mem 98: 341-347, 2012.

Pick, L., Meltzer, E., & Borod, J. (2012). The neuropsychology of emotion recognition. In H. Pashler, T. Crane, F. Ferreira, M. Kinsbourne, & R. Zemel (Eds.), The encyclopedia of the mind. Thousand Oaks, CA: Sage Publications.

Myers, T. E., Twaite, J., Meltzer, E. P., Teague, E. B., Murray, E. M., & Borod, J. C. (2012). Emotion lateralization: Theories, paradigms, and processing modes. In T. Dutta, M. K. Mandal, & S. Kumar (Eds.), Bias in human behavior. Hauppauge, NY: Nova Science Publishers, Inc.

Murray, E. M., Krause, W., Bono, A., & Borod, J. C. (2012). Asymmetry of facial expressions of emotion. In M. K. Mandal & A. Awasthi (Eds.) Facial Expression of Emotion: Perspectives from Social, Biological and Computational Sciences. New Delhi, India: Springer.

Teague, E.B., Meltzer, E. P., Savage, K., Alterescu, K., Twaite, J., & Borod, J. C. (2012). Emotions/social neuropsychology. In B. Barr & L. Bieliauskas (Eds.), Oxford history of clinical neuropsychology. New York, NY: Oxford University Press.

Araiba, S. & Brown, B.L.  (2012, March). The role of intruded cues in animal timing. Poster presented at the 26th annual Sigma Xi Research Day, Queens College, Flushing, NY.

Heffernan, M., Fraley, R. C., Vicary, A., & Brumbaugh, C. C. (2012).  Attachment features and functions in romantic relationships. Journal of Social and Personal Relationships, 29, 671 – 693.

Chen C-C, Tam D, Brumberg J.C. Sensory Deprivation Differentially Impacts the Dendritic Development of Pyramidal Versus Non-Pyramidal Neurons in Layer VI of Mouse Barrel Cortex. Brain Structure and Function, 217(2012):435-46.

Chen CC, Lu HC, Brumberg J.C. mGluR5 Knockout Mice Display Increased Dendritic Spine Densities. Neurosci Lett. 524(2012):65-8.

Barrera K., Chu P., Abramowitz J.A., Steger R., Ramos R.L., Brumberg J.C. Organization of Myelin in the Mouse Somatosensory Barrel Cortex and the Effects of Sensory Deprivation. Developmental Neurobiology, 2012. PMID:23047707

Chacko, A., Anderson, L.*, & Rajwan, E. * (2012). A Developmental Perspective on Behavioral Indicators of Early Onset Disruptive Behavior Disorders. In C. Thomas & K Pope (Eds). The Origins of Antisocial Behavior: A Developmental Perspective (pp. 89-114). New York: Oxford University Press.

Rajwan, E.*, Chacko, A., & Moeller, M.# (2012). Non-pharmacological intervention for preschool ADHD: State of the evidence and implications for practice.  Professional Psychology: Research and Practice, 43, 520-526. doi: 10.1037/a0028812

Chacko, A., Wymbs, B.T., Chimiklis, A.*, Wymbs, F.A., & Pelham, W.E. (2012). Evaluating a comprehensive strategy to improve engagement to group-based behavioral parent training for high-risk families of children with ADHD. Journal of Abnormal Child Psychology, 40, 1351-1362. doi: 10.1007/s10802-012-9666-z

Frazier, S. L., Chacko, A., Van Gessel, C., O'Boyle, C., & Pelham, W. E. (2012). The summer treatment program meets the south side of Chicago: Bridging science and service in urban after-school programs. Child and Adolescent Mental Health, 17, 86-92.

Fan, J. (2012). Attentional Network Deficits in Autism Spectrum Disorders. In J. Buxbaum & P. R. Hof (Ed.), The Neuroscience of Autism Spectrum Disorders: Elsevier

Ivanov, I, Liu, X., Shulz, K., Fan, J. London, E., Friston, K., Halperin, J.M., & Newcorn, J.H. (2012). Parental substance abuse and function of the motivation and behavioral inhibition systems in drug-naïve youth, Psychiatry Research: Neuroimaging, online available

Schulz, K.P.,Fan, J., Bédard,A-C. V., Clerkin, S. M., Ivanov, I. Tang, C. Y., Halperin, J. H., Newcorn, J. H. (2012). Common and unique therapeutic mechanisms of stimulant and non-Stimulant treatments for childhood ADHD, Archives of General Psychiatry, 69(9), 952-961

Doyle-Thomas, K. A. R., Kushki, A., Emma G. Duerden, E. G., Taylor, M. J. Lerch, J. P.Soorya, L. V., Wang, T., Fan, J., Anagnostou, E. (2012). The effect of diagnosis, age and symptom severity on cortical surface area in the cingulate cortex and insula in autism spectrum disorders, Journal of Child Neurology

Gu, X., Gao, Z.X., Wangm X.C., Liu, X. Knight, R.T., Hof, P. R., & Fan, J. (2012). Anterior insular cortex is necessary for empathic pain perception, Brain, 135(9), 2726-2735

Fan, J., Xu, P.F., Van Dam, N.T., Eilam-Stock, T*., Gu, X.S., Luo, Y. J. & Hof, P. R. (2012). Spontaneous brain activity relates to autonomic arousal, Journal of Neuroscience, 32(23), 11176-11186

Ivanov, I., Liu, X., Schulz, K. P., Clerkin, S., Friston, K., Newcorn, J. H., & Fan, J. (2012). Effects of Reward Cues and Outcomes on Motivational and Attentional Networks: an fMRI Study, Brain and Behavior

Fan, J. Bernardi, S., Van Dam,N.T., Anagnostou,E., Gu, X., Martin, L., Park, Y., Liu, X., Kolevzon, A., Soorya, L., Grodberg, D., Hollander, E., & Hof, P.R. (2012). Functional deficits of the attentional networks in autism, Brain and Behavior, 2(5): 647–660

Fields. L. (2012). Remarks Regarding Catania’s “The Flight from Experimental Analysis.” European Journal of Behavior Analysis of Behavior, 13, 201-205.

Doran, E. & Fields, L. (2012). All stimuli are equal, but some are more equal than others: Measuring relational preferences within an equivalence class. Journal of the Experimental Analysis of Behavior, 98, 243-256.

Fields, L., Arntzen, E., Nartey, R., & Eilifsen, C. (2012). Effects of a meaningful, a discriminative, and a meaningless stimulus on equivalence class formation. Journal of the Experimental Analysis of Behavior, 97, 163-181.

Fields, L. & Spear, J. (2012). Measuring joint stimulus control by complex-graph/description correspondences. The Psychological Record, 62, 279-294.

Pytte, C. L., & Fienup, D. M. (2012).  Using equivalence-based instruction to increase efficiency in teaching neuroanatomy.  The Journal of Undergraduate Neuroscience Education (JUNE), 10, 125-131.

Goodwin RD, Lavoie K, Jenkins EF, Fedoronko D, Brown ES.  Depression, Anxiety and COPD: The unexamined role of nicotine dependence.  Nicotine and Tobacco Research 2012; 14 (2): 176-183.

Goodwin RD, Zvolensky MJ, Keyes KM, Hasin DS. Mental disorders and cigarette use among adults in the United States.  American Journal on Addictions 2012; 21 (5): 416-423

Goodwin RD, Styron TH.  Perceived quality of early paternal relationships and mental health in adulthood.  Journal of Nervous and Mental Disease 2012; 200 (9): 791-795.

Goodwin RD, Wamboldt FS.  Childhood physical abuse and respiratory disease in the community: The role of mental health and cigarette smoking.  Nicotine and Tobacco Research 2012; 14(1):91-7.

Goodwin RD. In Medicopsychiatric issue (Katon WJ, Ed). Asthma and suicide: Current knowledge and new directions. Current Psychiatry Reviews 2012; 14 (1): 30-35.

Grover K, Goodwin RD, Zvolensky MJ. Does current versus former smoking play a role in the relationship between anxiety and mood disorders and nicotine dependence? Addictive Behaviors 2012; 37 (5): 682-685.

Grover K, Zvolensky MJ, Lemeshow AR, Galea S, Goodwin RD. Does quitting smoking during pregnancy have a long-term impact on smoking status? Drug and Alcohol Dependence 2012; 123:110-114.

Goodwin RD, Demmer R, Galea S, Lemeshow AL, Ortega AN, Beautrais AL. Asthma and suicide attempts among adults in the National Health and Nutrition Examination Survey (NHANES). Journal of Psychiatric Research 2012; 46: 1002-1007.

Goodwin RD, Robinson M, McKeague I, Sly P, Susser E, Mattes E.  Severity of asthma and mental health outcomes: A birth cohort study. Psychological Medicine 2012; Aug 29: 1-10.

Goodwin RD, Bandiera FC, Steinberg D, Ortega AN, Feldman JM. Asthma and Mental Health among Youth: Etiology, Current Knowledge and Future Directions. Expert Review of Respiratory Medicine 2012; 6 (4): 397-406.

Goodwin RD, Galea S, Perzanowski M, Jacobi F. Impact of allergy treatment on the association between allergies and mood and anxiety in a population sample. Clinical and Experimental Allergy 2012; 42 (12): 1765-1771.

Goodwin RD, Prescott M, Tamburrino M, Calabrese JR, Liberzon I, Galea S. Cigarette smoking and subsequent risk of suicidal ideation among National Guard Soldiers. Journal of Affective Disorders 2012; Nov 8.

Gomes H, Duff M, Ramos M, Molholm S, Foxe J, Halperin J. (2012). Auditory selective attention and processing in children with attention-deficit/ hyperactivity disorder.  Clinical Neurophysiology.  123(2):293-302. PMID: 21839675.

Gopin C, Healey DM, Grossman B, Campbell SB, Halperin JM. (2012). Task palatability, but not structure, differentially influences mother-child interactions in ADHD children with and without ODD.  Infant and Child Development.  21 (4), 394–410.

Nomura Y, Marks DJ, Grossman B, Yoon M, Loudon H, Stone J, Halperin JM. (2012).Exposure to gestational diabetes and low SES: Effects on neurocognitive development and risk of Attention Deficit Hyperactivity Disorder in offspring. Archives of Pediatrics & Adolescent Medicine.166(4):337-43. PMID: 22213602.

Ivanov I, Liu X, Shulz K, Fan J, London E, Friston K, Halperin JM, Newcorn JH.(2012). Parental substance abuse and function of the motivation and behavioral inhibition systems in drug-naïve youth. Psychiatry Research: Neuroimaging, 201(2):128-35. PMID: 22386967.

Gopin C, Berwid O, Marks DM, Mlodnicka A, Halperin JM.  (2012). ADHD preschoolers with and without ODD: Do they act differently depending upon degree of task engagement/ reward? Journal of Attention Disorders. 2012 Feb 8. [Epub ahead of print]. PMID: 22323121.

Schulz KP, Fan J, Bédard ACV, Clerkin SM, Ivanov I, Tang CY, Halperin JM, Newcorn JH. (2012). Common and Unique Therapeutic Mechanisms of Stimulant and Non-Stimulant Treatments for ADHD. Archives of General Psychiatry, 69(9):952-61. PMID: 22945622

Halperin JM, Marks DJ, Bedard ACV, Chacko A, Curchack JT, Yoon CA, Healey DM. (2012). Training Executive, Attention and Motor Skills (TEAMS): A Proof-of-Concept Study in Preschool Children with ADHD. Journal of Attention Disorders.  2012 Mar 5. [Epub ahead of print]. PMID: 22392551.

Halperin JM, Bedard ACV, Curchack-Lichtin JT. (2012). Preventive interventions for ADHD: A neurodevelopmental perspective. Neurotherapeutics. 9(3):531-41. PMID: 22692794.

Berwid OG, Halperin JM. (2012). Emerging Support for a Role of Exercise in Attention-Deficit/Hyperactivity Disorder Intervention Planning. Current Psychiatry Reports. 14, 543-551. PMID: 22895892

DeSanctis VA, Nomura Y, Newcorn JH, Halperin JM (2012).  Childhood maltreatment and conduct disorder: Independent predictors of criminal outcomes in ADHD youth. Child Abuse & Neglect, 36, 782– 789. PMID: 23146580.

O’Neill S, Rajendran K, Halperin JM. (2012). More than child's play: The potential benefits of play-based interventions for young children with ADHD. Expert Review of Neurotherapeutics. 12(10):1165-7. doi: 10.1586/ern.12.106. PMID: 23082729

Thornton, V., O’Neill, S., Marks, D., & Halperin, J. M. (March, 2012). Early predictors of learning disabilities in school-age children. Presentation to the Sigma XI Scientific Research Society, New York.

Kokkinos, X., O’Neill, S., Rajendran, K., & Halperin, J. M. (March, 2012). Does parenting style moderate the relation of inhibitory control to ADHD severity two years later? Presentation to the Sigma XI Scientific Research Society, New York.

Hernandez, D., O’Neill, S., & Halperin, J. M. (March, 2012). Early neuropsychological predictors of later math disability in hyperactive and inattentive children. Presentation to the Sigma XI Scientific Research Society, New York.

Nessler, D., Friedman, D. and Johnson, R., Jr.  A new account of the effect of probability on task switching: ERP evidence following the manipulation of switch probability, cue informativeness and predictability. Biological Psychology, 91: 245-262, 2012.

Johnson, R., Jr., Nessler, D. and Friedman, D. Temporally-specific divided attention tasks in young adults reveal the temporal dynamics of episodic encoding failures in elderly adults.Psychology and Aging, 2012.

Berwid, O.G., Halperin, J.M., Johnson, R.E., Jr. and Marks, D.J. Preliminary evidence for reduced post-error reaction time slowing in hyperactive/inattentive preschool children. Child Neuropsychology, 2012.

Madzharova, M. S. G, Sturmey, P., & Jones, E. A. (2012). Training staff to increase peer manding in students with autism: Pilot data. Behavioral Interventions. DOI: 10.1002/bin.1349.

Nomura Y, Marks DJ, Grossman B, Yoon M, Loudon, H, Stone J, Halperin JM. Exposure to gestational diabetes and low SES: Effects on neurocognitive development and risk of attention deficit hyperactivity disorder in offspring.  Arch Ped Adol Med 2012, 166(4): 337-343.

Nomura Y, Hurd YL, Pilowsky DJ. Life-time risk for substance use among offspring of abusive family environment from the community. Subst Use Misuse. 2012 Oct;47(12):1281-92.

Jutras-Aswad D, Jacobs M, Yiannoulos G, Nomura Y, Xun L, Panagotis R, Hurd Y.  Cannabis dependence valnerablity related to synergism between negative emotional trait and DRD2 and PENK polymorphisms. PLos One 2012;7(6):e39243. PMCID:3382183.

Nobel K, Fifer WP, Rauh V, Nomura Y, Andrews H. Academic achievement varies with gestational age among children born at term. Pediatrics 2012; 130(2): 257-264. PMCID: 3408682.

De Sanctis VAQP, Nomura Y, Newcorn JHC, Halperin JM.QCF Childhood Maltreatment and Conduct Disorder: Independent Predictors of Criminal Outcomes in Young Adults Diagnosed with ADHD in Childhood. J Child Abuse Maltreatment 2012; 36(11-12): 782-789. PMID: 23146580. PMCID: PMC3514569.

Nomura Y, Lambertini LC, Rialdi AM, Lee MJC, Mystal EYD, Grabie MU, Manaster IC, Huynh NU, Finik JU, Davey MH, Davey KH, Stone JC, Loudon HC, Eglinton GC, Hurd YC, Newcorn JHC, Chen JC. Global methylation in placenta and umbilical-cord blood from pregnancies with metabolic syndromes. Repro Sci. 2012.

Pytte, C.L., George, S., Korman, S., David, E., Bogdan, D., Kirn, J.R. (2012) Adult neurogenesis is associated with the maintenance of a stereotyped, learned motor behavior. The Journal of Neuroscience 32:7052-7057.

Pytte, C.L., Fienup, D.M. (2012) Using equivalence class based instruction to increase efficiency in teaching neuroanatomy. Journal of Undergraduate Neuroscience Education 10:125-131.

Ramsey, P. H., Ramsey, P. P., (2012). Pairwise Testing of Group Mean Vectors in MANOVA with Small Samples. Journal of Statistical Computation and Simulation, iFirst, Feb. 1, 1–21

Ramsey, P. H. and Ramsey, P. P., (2012). Corrigendum Updated version of the critical values of the standardized fourth moment. Journal of Statistical Computation and Simulation, iFirst, April, 19, 1–2.

Kest, K., Cruz, I., Chen, D.H., Galaj, E. and Ranaldi, R. (2012).  A food-associated CS activates c-Fos in VTA DA neurons and elicits conditioned approach. Behavioural Brain Research, 235, 150-157.

Miner, P., Shimonova, L., Khaimov, A., Borukhova, Y., Ilyayeva, E., Ranaldi, R. and Bodnar, R.J. (2012). General, kappa, delta and mu opioid receptor antagonists mediate feeding elicited by the GABA-B agonist baclofen in the ventral tegmental area and nucleus accumbens shell in rats: Reciprocal and regional interactions. Brain Research, 1443, 34-51.

Rutherford, B.R., Mori, S., Sneed, J.R., Pimontel, M.A., Roose, S.P. (2012) Contribution of spontaneous improvement to placebo response in depression: A meta-analytic review. J Psychiatr Res. DOI  0.1016/j.jpsychires.2012.02.008

Brown, P.J., Liu, L., Sneed, J.R., Pimontel, M.A., Devanand, D.P., Roose, S.P. (2012). Speed of processing and depression affect function in older adults with mild cognitive impairment. American Journal of Geriatric Psychiatry. DOI 0.1097/JGP.0b013e318252e3be

Pimontel, M. Culang, M., Morimoto, S., & Sneed, J. R. (2012). Executive dysfunction and antidepressant non-response: A review of the evidence. International Journal of Geriatric Psychiatry. 27(9), 893-9.

Sneed, J. R., Whitbourne, S. K., Schwartz, S., J., Huang, S. (2012). The relationship between identity, intimacy, and midlife well-being: Findings from the Rochester Adult Longitudinal Study. Psychology and Aging, 27, 318-323.

Watson, P., Storbeck, J., Mattis, P., & Mackay, M. (2012). Cognitive and emotional abnormalities in Systemic Lupus Erythematosis: Evidence for amygdala dysfunction. Neuropsychology Review, 22, 252-270

Storbeck, J. (2012). Performance costs when emotion tunes inappropriate cognitive abilities: Implications for mental resources and behavior. Journal of Experimental Psychology: General, 141, 411-416.

Sturmey, P.; & Hersen, M. (2012.) Handbook of evidence-based practice. Volume 2. Adults. Hoboken: NY: Wiley USA.

Sturmey, P.; & Hersen, M. (2012.) Handbook of evidence-based practice. Volume 1. Children and adolescents. Hoboken: NY: Wiley USA.

Hamelin, J., Travis, R. & Sturmey, P. (2012.) Anger management and intellectual disabilities. Journal of Mental Health Research in Developmental Disabilities. 6, 60-70.

Gianoumis, T. & Sturmey, P. (2012). Generalization procedures in training interventionists for individuals with developmental disabilities. BehaviorModification,36, 619-629

Sturmey, P. (2012). Treatment of psychopathology in persons with intellectual and other disabilities. Canadian Journal of Psychiatry, 57, 593–600.

Gianoumis, T., Seiverling, L. & Sturmey, P. (2012.) The effects of behavior skills training on correct teacher implementation of natural language paradigm teaching skills and child behavior. Behavioral Interventions, 27, 57–74,

Ward-Horner, J. C. & Sturmey, P. (2012). Component analysis of behavior skills training in functional analysis. Behavioral Interventions, 27, 75–92.

Berkovits, M., Sturmey, P. & Alvero, A. (2012). Effects of individual and group contingency interventions on attendance in adolescent part-time employees. Journal of Organizational and BehaviorManagement. 32, 152-161

Seiverling, L., Williams, K., Sturmey, P. & Hart, S. (2012). Effects of behavioral skills training on parental treatment of children’s food selectivity. Journal of Applied Behavior Analysis, 45, 197-204.

Ward-Horner, J., Seiverling, L. J. & Sturmey, P. (2012). Functional behavior assessment and analysis. In: J. L. Matson, & P. Sturmey, P. (Eds.) Handbook of Autism Spectrum Disorders (pp. 271-286). Springer

Seiverling, L. J., Williams, K. Ward-Horner, J. & Sturmey, P.  (2012). Interventions to Treat Feeding Problems in Children with Autism Spectrum Disorders: A Systematic Review. J. L. Matson, & P. Sturmey, P. (Eds.) Handbook of Autism Spectrum Disorders (pp. 491-508). New York: Springer

Hamelin, J., Moum, L. & Sturmey, P. (2012). Classification and Diagnostic Systems of Psychopathology in Persons with Intellectual Disability. In: E. Tsakanikos & J. McCarthy (Ed.) Handbook of Disabilities. New York: Springer.Psychopathology in Intellectual

Didden, R., Sturmey, P., Sigafoos, J., Lang, R., O’Reilly, M. F., & Lancioni, G. E. (2012). Nature, prevalence and characteristics of challenging behavior. J. L. Matson (Ed.) Functional assessment for challenging behaviors. (pp. 45-64). New York: Springer.

Sturmey, P. Maffei-Almodovar, L. Madzharova, M. & Cooper, J. (2012.) Self-Injurious Behavior. In P. Sturmey & M. Hersen (Eds.) The Handbook of Evidence-Based Practice in Clinical Psychology. Volume 1. Children and Adolescents, (pp. 477-492). Hoboken, Jersey: Wiley USA

 

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